Intake module¶

This module contains rules for adding new sequences into the analysis. Currently, this just involves taking new sequences and appending them to existing onces when inheriting from a previous McCoy run.

Rules¶

Rule combine[source]¶

Combine multiple sequence files together into a single file.

Input¶:

data – the sequence files to be concatenated

Output¶:

a single concatenated fasta file

Conda¶:

channels:
  - bioconda
  - conda-forge
dependencies:
  - seqkit==2.1.0